PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC05G19110.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 224aa MW: 24552.6 Da PI: 5.9792

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC05G19110.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.9e-10	69	116	3	50
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +l + rr NReA r++R++Kka + Lee+vk+L a N++L +l+ OPUNC05G19110.1 69 DLTKPRRPLGNREAVRKYREKKKAHAAFLEEEVKKLRAANQQLLRRLQ 116 6778899999*********************************98887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.5E-15	67	135	No hit	No description
SMART	SM00338	7.2E-11	67	134	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.887	69	116	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.3E-13	71	124	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.25E-8	72	117	No hit	No description
CDD	cd14686	2.18E-13	74	125	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence Send to blast
MDDVPSQLLF SHPEVPDSFD DFLNNITTCS HTHTCNPPGP SATTHTHTCL HTHTQVFATG 60 SGEDDIKEDL TKPRRPLGNR EAVRKYREKK KAHAAFLEEE VKKLRAANQQ LLRRLQGHAA 120 LEAEVIRLRS ILLDVRGKID MEIGTFPYQK PCSVGSVGCT DPSMCFNGNS EIGGVWEECS 180 RPAGADRMID KDGSMSQDID IPGPVHSISM DVVGSLVTSA SLSE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC112160	0.0	AC112160.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1579_G03, complete sequence.
GenBank	AK072281	0.0	AK072281.1 Oryza sativa Japonica Group cDNA clone:J023018E07, full insert sequence.
GenBank	AK104986	0.0	AK104986.1 Oryza sativa Japonica Group cDNA clone:002-110-E11, full insert sequence.
GenBank	AP014961	0.0	AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015638714.1	1e-143	PREDICTED: uncharacterized protein LOC4339196
Swissprot	Q8GTS2	2e-56	BZP23_ARATH; Basic leucine zipper 23
TrEMBL	A0A0E0L488	1e-168	A0A0E0L488_ORYPU; Uncharacterized protein
STRING	LOC_Os05g41540.1	1e-142	(Oryza sativa Japonica Group)
STRING	ORGLA05G0186200.1	1e-142	(Oryza glaberrima)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3831	36	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	1e-37	bZIP family protein